Spike Train Analysis Toolkit Version 1.1 (April 29, 2009) Documentation

• Introduction ← Read this first!
• Download and installation
• Example datasets and toolkit demos
• Text-based input file format
• Input data structure
• Output data structures
• Options and parameters for information methods
• Options and parameters for entropy methods
• Function reference
• C API (under construction)
• Version history and release notes
• License
• Contributing the toolkit

The Spike Train Analysis Toolkit was developed by Michael A. Repucci, David H. Goldberg, Jonathan D. Victor, and Daniel Gardner of the Laboratory of Neuroinformatics at Weill Medical College of Cornell University.

Direct questions and feedback to Michael Repucci at mar2022 at med dot cornell dot edu. Also email Michael if you would like to be added to the Spike Train Analysis Toolkit mailing list.

New → We are currently working to set up a toolkit wiki, to which all users on our mailing list will be added. Users of the STAToolkit who have not contacted us, please send us your email to be added to the user list.

Funding provided by the Human Brain Project/Neuroinformatics initiative via MH068012 from NIMH, NINDS, NIA, NIBIB, and NSF with additional support from MH/NS057153 from NIMH and NINDS.

We suggest that publications that include results obtained from this resource include an acknowledgement such as "Information theoretic analyses in this study were conducted with the Spike Train Analysis Toolkit—a neuroinformatics resource funded by the NIH's Human Brain Project."